Issues - neuro-sig/NeuroFedora

#416 Package flatironinstitute/CaImAn: Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

Opened 6 days ago by ankursinha. Modified 6 days ago

D: Normal F: Data Analysis F: Neuroimaging S: Needs packaging T: Software Normal

#407 Package spinalcordtoolbox: software dedicated to the processing and analysis of spinal cord MRI data.

Opened 2 months ago by ankursinha. Modified 2 months ago

D: Normal F: Neuroimaging S: Needs packaging T: Software Normal

#406 Package brainets/frites: Framework for Information Theoretical analysis of Electrophysiological data and Statistics

Opened 2 months ago by ankursinha. Modified 2 months ago

D: Easy F: Data Analysis S: Needs packaging T: Software good first issue Normal

#405 Package OWL-RL

Opened 2 months ago by major. Modified 2 months ago

D: Easy S: Bad licence S: Needs packaging T: Software Normal

#404 Package PyOIF: Computational tool for modelling of multi-cell flows in complex geometries

Opened 3 months ago by ankursinha. Modified 3 months ago

D: Hard F: Computational neuroscience S: Needs packaging T: Software Normal

#401 Package pyplane: Phase plane analysis of nonlinear systems

Opened 3 months ago by ankursinha. Modified 3 months ago

D: Easy F: Utilities good first issue S: Needs packaging T: Software Normal

#398 Package NeurodataWithoutBorders/nwb-jupyter-widgets: Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.

Opened 3 months ago by ankursinha. Modified 3 months ago

T: Software S: Needs packaging F: Utilities F: Data Analysis D: Normal good first issue Normal

#397 Package holoviews: Stop plotting your data - annotate your data and let it visualize itself.

Opened 3 months ago by ankursinha. Modified 3 months ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#396 Package pypesto: Parameter EStimation TOolbox for python

Opened 3 months ago by ankursinha. Modified 3 months ago

T: Software S: Needs packaging F: Computational neuroscience F: Utilities D: Easy good first issue Normal

#394 Package alejoe91/MEArec: Fast and customizable of extracellular recordings on MEA

Opened 4 months ago by ankursinha. Modified 4 months ago

T: Software S: Needs packaging F: Utilities F: Data Analysis D: Easy good first issue Normal

#387 Package BlueBrain/CoreNeuron: Simulator optimized for large scale neural network simulations.

Opened 5 months ago by ankursinha. Modified 5 months ago

D: Normal F: Computational neuroscience T: Software S: Needs packaging Normal

#386 Package gallantlab/pycortex: Pycortex is a python-based toolkit for surface visualization of fMRI data

Opened 5 months ago by ankursinha. Modified 5 months ago

T: Software S: Needs packaging F: Neuroimaging F: Utilities D: Easy S: Needs documentation good first issue Normal

#383 Package JASP: Graphical Statistical Software for Common Statistical Designs

Opened 6 months ago by ankursinha. Modified 6 months ago

T: Software S: Needs packaging F: Data Analysis D: Normal S: Needs documentation good first issue Normal

#382 Package BlueBrain/nmodl: Code Generation Framework For NEURON MODeling Language (python)

1

Opened 6 months ago by ankursinha. Modified 3 months ago

F: Computational neuroscience S: Needs packaging T: Software D: Hard Normal

#380 Package chlubba/catch22: catch-22: CAnonical Time-series CHaracteristics

1

Opened 6 months ago by ankursinha. Modified 6 months ago

D: Normal F: Data Analysis S: Needs packaging T: Software Normal

#379 Package Pycabnn: Efficient and Extensible Software to Construct an Anatomical Basis for a Physiologically Realistic Neural Network Model

Opened 6 months ago by ankursinha. Modified 6 months ago

D: Easy F: Computational neuroscience S: Needs packaging T: Software good first issue Normal

#378 Package SpikeInterface/spikely: A GUI for running popular spike sorting algorithms on extracellular data of any file format.

Opened 6 months ago by ankursinha. Modified 6 months ago

D: Normal F: Data Analysis S: Needs packaging T: Software Normal

#376 Package brian2tools

Opened 7 months ago by ankursinha. Modified 7 months ago

T: Software S: Needs packaging F: Computational neuroscience F: Utilities F: Data Analysis D: Normal Normal

#375 Package Bioconductor - bigPint

Opened 7 months ago by ankursinha. Modified 7 months ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#373 Package GHFC/HyPyP: The Hyperscanning Python Pipeline

Opened 7 months ago by ankursinha. Modified 7 months ago

T: Software S: Needs packaging F: Neuroimaging F: Data Analysis D: Normal good first issue Normal

#372 Package llvmlite: A lightweight LLVM python binding for writing JIT compilers

1

Opened 8 months ago by ankursinha. Modified a month ago

D: Normal F: Utilities S: Needs packaging S: Waiting on upstream T: Software Normal

#371 Package numba

2

Opened 8 months ago by ankursinha. Modified a month ago

D: Normal F: Utilities S: Needs packaging T: Software S: Waiting on upstream Normal

#370 Package nwb-explorer

Opened 8 months ago by ankursinha. Modified 8 months ago

D: Normal F: Data Analysis F: Utilities T: Software S: Needs packaging Normal

#367 Package adamreeve/npTDMS: NumPy based Python module for reading TDMS files produced by LabView

Opened 8 months ago by ankursinha. Modified 8 months ago

D: Normal F: Data Analysis F: Neuroimaging S: Needs packaging T: Software Normal

#362 Package AllenInstitute/AllenSDK: code for reading and processing Allen Institute for Brain Science data

Opened 8 months ago by ankursinha. Modified 8 months ago

D: Normal F: Utilities S: Needs packaging T: Software Normal

#361 Package SpikeInterface/spiketoolkit: Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.

1

Opened 8 months ago by ankursinha. Modified 8 months ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#360 Package mopet

Opened 8 months ago by ankursinha. Modified 8 months ago

D: Normal F: Utilities S: Needs packaging T: Software Normal

#359 Package cellfinder: Automated 3D cell detection and registration of whole-brain images

Opened 9 months ago by ankursinha. Modified 9 months ago

T: Software S: Needs packaging F: Neuroimaging F: Utilities F: Data Analysis D: Normal Normal

#358 Package betterbib: Update BibTeX files with info from online resources.

Opened 9 months ago by ankursinha. Modified 9 months ago

D: Easy good first issue S: Needs packaging T: Software F: Utilities Normal

#352 Package phy: interactive visualization and manual spike sorting of large-scale ephys data

Opened 9 months ago by ankursinha. Modified 9 months ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#350 Package NEAT

Opened 9 months ago by ankursinha. Modified 9 months ago

D: Easy F: Computational neuroscience S: Needs packaging T: Software good first issue Normal

#349 Package ctlee/gamer: Geometry-preserving Adaptive Mesher

1

Opened 9 months ago by ankursinha. Modified 9 months ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#347 Package python-doit

Opened 10 months ago by ankursinha. Modified 10 months ago

D: Normal F: Utilities S: Needs packaging T: Software Low

#345 Package Brainrender

Opened 10 months ago by ankursinha. Modified 10 months ago

D: Normal F: Utilities S: Needs packaging T: Software Normal

#344 Package nengo

Opened 10 months ago by ankursinha. Modified 10 months ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Low

#341 Package python-autograd

3

Opened 11 months ago by ankursinha. Modified 7 months ago

D: Easy good first issue F: Utilities T: Software S: Needs packaging Normal

#334 Package neurolib-dev/neurolib: Easy whole-brain modeling for computational neuroscientists

1

Opened a year ago by ankursinha. Modified 8 months ago

D: Easy F: Computational neuroscience S: Needs packaging T: Software Normal

#333 Package: Neurotune, a package for optimizing electical models of excitable cells.

Opened a year ago by ankursinha. Modified a year ago

D: Easy F: Computational neuroscience F: Utilities S: Needs packaging T: Software Normal

#319 Package Ermentrout/xppaut: General differential equation solver and bifurcation package

Opened a year ago by ankursinha. Modified a year ago

D: Normal F: Computational neuroscience F: Utilities S: Needs packaging T: Software Normal

#314 Package dcmstack: DICOM to Nifti conversion with meta data preservation

Opened a year ago by alciregi. Modified 7 months ago

D: Easy F: Utilities T: Software S: Needs packaging good first issue Low

#305 Package napari/napari: napari: a fast, interactive, multi-dimensional image viewer for python

Opened a year ago by ankursinha. Modified a year ago

D: Normal F: Utilities S: Needs packaging T: Software Normal

#304 Package pynrrd

Opened a year ago by alciregi. Modified 11 months ago

D: Easy F: Utilities S: Needs packaging good first issue T: Software Normal

#297 Package netypyne-UI

1

Opened a year ago by ankursinha. Modified a year ago

F: Computational neuroscience S: Needs packaging T: Software D: Hard Normal

#295 Package jpgill86/neurotic: Curate, visualize, annotate, and share your behavioral ephys data using Python

Opened a year ago by ankursinha. Modified a year ago

D: Normal F: Data Analysis S: Needs packaging T: Software Normal

#289 Package AlexEMG/DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals, including humans

Opened a year ago by ankursinha. Modified a year ago

D: Normal F: Utilities S: Needs packaging T: Software Normal

#288 Package KNOSSOS — 3D Image Annotation

Opened a year ago by ankursinha. Modified a year ago

D: Normal F: Data Analysis F: Neuroimaging S: Needs packaging T: Software Normal

#287 Package rochefort-lab/fissa: A Python toolbox for Fast Image Signal Separation Analysis, designed for Calcium Imaging data.

Opened a year ago by ankursinha. Modified 11 months ago

D: Easy F: Utilities S: Needs packaging T: Software good first issue Normal

#286 Package flatironinstitute/CaImAn: Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

Opened a year ago by ankursinha. Modified a year ago

D: Normal F: Data Analysis F: Computational neuroscience S: Needs packaging T: Software Normal

#283 scidash/neuronunit: A package for data-driven validation of neuron and ion channel models using SciUnit

1

Opened a year ago by ankursinha. Modified 8 months ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#278 Package PyRates: a tool for building rate-based neural models

Opened a year ago by mhough. Modified a year ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

neuro-sig / NeuroFedora

Issues
213 Open 202 Closed

neuro-sig / NeuroFedora

Source Code

Issues 213 Open 202 Closed

Issues
213 Open 202 Closed