Issues - neuro-sig/NeuroFedora

#562 Package lqrt: obust Hypothesis Testing of Location Parameters using Lq-Likelihood-Ratio-Type Test

1

Opened 2 months ago by ankursinha. Modified 2 months ago

D: Easy F: Data Analysis F: Utilities S: Needs packaging S: Needs review Normal

#561 Package dabest: Data Analysis and Visualization using Bootstrap-Coupled Estimation

Opened 2 months ago by ankursinha. Modified 2 months ago

D: Normal F: Data Analysis good first issue S: Needs packaging T: Software Normal

#560 Package vispy: high-performance interactive 2D/3D data visualization library

Opened 3 months ago by ankursinha. Modified 3 months ago

D: Normal F: Data Analysis F: Utilities good first issue S: Needs packaging T: Software Normal

#559 Package pydapsys: an open-source library for accessing electrophysiology data recorded with DAPSYS

Opened 3 months ago by ankursinha. Modified 3 months ago

D: Easy F: Data Analysis F: Utilities good first issue S: Needs packaging T: Software Normal

#557 Package SWC_BATCH_CHECK: Provides methods for batch validating data in SWC neuron morphology files

Opened 3 months ago by ankursinha. Modified 3 months ago

D: Easy F: Data Analysis F: Utilities good first issue S: Needs packaging T: Software Normal

#553 Package Grape: GRAPE is a Rust/Python Graph Representation Learning library for Predictions and Evaluation

2

Opened 6 months ago by ankursinha. Modified 6 months ago

D: Normal F: Computational neuroscience F: Utilities S: Needs packaging T: Software F: Data Analysis good first issue Normal

#550 Package PHATE: Visualizing Transitions and Structure for Biological Data Exploration

1

Opened 6 months ago by ankursinha. Modified 6 months ago

D: Easy F: Data Analysis good first issue S: Needs packaging T: Software Normal

#547 Package MouseLand/rastermap: A multi-dimensional embedding algorithm

Opened 7 months ago by ankursinha. Modified 7 months ago

D: Normal F: Data Analysis F: Utilities good first issue S: Needs packaging T: Software Normal

#546 Package sanpy: software for whole-cell current clamp analysis

Opened 7 months ago by ankursinha. Modified 7 months ago

D: Normal F: Data Analysis F: Neuroimaging good first issue S: Needs packaging T: Software Normal

#545 Package pynapple: PYthon Neural Analysis Package

1

Opened 7 months ago by ankursinha. Modified 7 months ago

F: Data Analysis D: Easy good first issue T: Software S: Needs packaging Normal

#541 Package python-meshparty: A package to work with meshes, designed around use cases for analyzing neuronal morphology.

3

Opened 10 months ago by ankursinha. Modified 7 months ago

D: Easy F: Data Analysis F: Utilities good first issue S: Needs packaging T: Software Normal

#532 Package mnelab: a GUI for MNE

3

Opened a year ago by ankursinha. Modified 7 months ago

D: Hard F: Data Analysis F: Neuroimaging S: Needs packaging T: Software Normal

#529 Package Neurokit: Python Toolbox for Neurophysiological Signal Processing

Opened a year ago by ankursinha. Modified a year ago

D: Normal F: Data Analysis good first issue S: Needs packaging T: Software Normal

#525 Package graphia: visual analytics application developed to aid the interpretation of large and complex datasets

1

Opened a year ago by ankursinha. Modified a year ago

D: Normal F: Data Analysis S: Needs packaging T: Software Normal

#523 Package genepy3D: a python library for quantitative geometry,

1

Opened a year ago by ankursinha. Modified a year ago

T: Software S: Needs packaging F: Utilities F: Data Analysis D: Normal good first issue Normal

#517 Package PeyracheLab/pynapple: PYthon Neural Analysis Package

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Easy F: Data Analysis good first issue S: Needs packaging T: Software Normal

#516 Package biokit/biokit: Bioinformatics in Python

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Easy F: Data Analysis good first issue S: Needs packaging T: Software Normal

#509 neurophysiological-analysis/FiNN: A Python Toolbox for the analysis of electrophysiological data

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging Normal

#507 Package olivercliff/pyspi: Comparative analysis of pairwise interactions in multivariate time series.

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities good first issue S: Needs packaging T: Software Normal

#506 Package barahona-research-group/hcga: Highly Comparative Graph Analysis - Code for network phenotyping

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal good first issue S: Needs packaging T: Software F: Data Analysis F: Utilities Normal

#504 Package CSDLLab/PyNeval: PyNeval, a toolbox for quantative analysis on neuron reconstruction result.

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Easy F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#500 Package Donders-Institute/bidscoin: BIDScoin converts your source-level neuroimaging data to BIDS

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Opened 2 years ago by ankursinha. Modified 20 days ago

D: Normal F: Data Analysis F: Neuroimaging F: Utilities S: Needs packaging T: Software Normal

#487 Package autoreject/autoreject: Automated rejection and repair of bad trials/sensors in M/EEG

1

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software good first issue Normal

#485 Package lmcinnes/umap: Uniform Manifold Approximation and Projection

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#484 Package aesara-devs/aesara: Aesara is a Python library that allows one to define, optimize, and efficiently evaluate mathematical expressions involving multi-dimensional arrays.

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#483 Package fides-dev/fides: Trust Region Optimization in Python

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Opened 2 years ago by ankursinha. Modified a year ago

T: Software S: Needs packaging F: Utilities F: Data Analysis D: Easy good first issue Normal

#481 Package PEtab-dev/libpetab-python: Python package for working with PEtab files

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#476 Package Anipose

1

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Neuroimaging F: Utilities S: Needs packaging T: Software Normal

#475 Package: Whitlock-Group/TRACER: A toolkit to register and visualize anatomical coordinates in the rat brain

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Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Neuroimaging F: Utilities S: Needs packaging T: Software Normal

#473 Package spikeinterface: module for creating flexible and robust spike sorting pipelines.

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Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#471 Package dandischema

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Opened 2 years ago by ankursinha. Modified 2 years ago

T: Software S: Needs packaging F: Utilities F: Data Analysis D: Normal D: Easy good first issue Normal

#470 Package lukelbd/proplot: 🎨 A powerful matplotlib wrapper for making beautiful, publication-quality graphics

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Easy F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#469 Package Klusters/Neuroscope/NDManager: Free Data Visualization and Processing Tools for Neurophysiologists

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Neuroimaging F: Utilities S: Needs packaging T: Software Normal

#466 Package python-mearec: Fast and customizable simulation of extracellular recordings on Multi-Electrode-Arrays.

3

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#459 Package PBLab/neural_collision_detection: Collide vasculature and neurons for fun and profit

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#458 Package R-catch22: R package for calculation of 22 CAnonical Time-series CHaracteristics

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Easy F: Data Analysis S: Needs packaging T: Software Normal

#457 Package rgobi

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis T: Software S: Needs packaging Normal

#456 Package ggobi

1

Opened 2 years ago by ankursinha. Modified a year ago

F: Data Analysis S: Needs packaging T: Software D: Normal Normal

#454 Package facebookresearch/nevergrad: A Python toolbox for performing gradient-free optimization

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#448 Package denisecailab/minian: miniscope analysis pipeline with interactive visualizations

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Neuroimaging S: Needs packaging T: Software Normal

#443 Package dandi: Command line client for interaction with DANDI archive elements

1

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Easy F: Data Analysis F: Neuroimaging F: Utilities S: Needs packaging T: Software Normal

#439 Package BlueBrain/morph-tool: A toolbox for morphology editing. It aims to provide small helper programs that perform simple tasks.

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#436 Package FlyBrainLab/NeuroMynerva

Opened 2 years ago by ankursinha. Modified 2 years ago

T: Software S: Needs packaging F: Utilities F: Data Analysis D: Hard Normal

#435 Package FlyBrainLab/FBLClient: FBLClient is a Python package that implements an API for accessing and manipulating the Fruit Fly Brain Observatory (FFBO) Project, built for the FlyBrainLab initiative.

1

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Easy F: Data Analysis F: Utilities S: Needs packaging T: Software S: Requested S: On hold Normal

#434 Package FlyBrainLab components

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities T: Software S: Needs packaging Normal

#416 Package flatironinstitute/CaImAn: Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Neuroimaging S: Needs packaging T: Software Normal

#406 Package brainets/frites: Framework for Information Theoretical analysis of Electrophysiological data and Statistics

4

Opened 3 years ago by ankursinha. Modified a year ago

D: Easy F: Data Analysis S: Needs packaging T: Software good first issue Normal

#398 Package NeurodataWithoutBorders/nwb-jupyter-widgets: Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.

Opened 3 years ago by ankursinha. Modified 3 years ago

F: Data Analysis F: Utilities good first issue S: Needs packaging T: Software D: Normal Normal

#397 Package holoviews: Stop plotting your data - annotate your data and let it visualize itself.

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#394 Package alejoe91/MEArec: Fast and customizable of extracellular recordings on MEA

1

Opened 3 years ago by ankursinha. Modified 2 years ago

D: Easy F: Data Analysis F: Utilities S: Needs packaging T: Software good first issue Normal

neuro-sig / NeuroFedora

Issues
268 Open 297 Closed

neuro-sig / NeuroFedora

Source Code

Issues 268 Open 297 Closed

Issues
268 Open 297 Closed