Issues - neuro-sig/NeuroFedora

#527 Package RatInABox: A python package for modelling locomotion in complex environments and spatially/velocity selective cell activity.

Opened 7 months ago by ankursinha. Modified 7 months ago

D: Easy F: Computational neuroscience F: Utilities good first issue S: Needs packaging T: Software Normal

#524 Package blenderNEURON: Exports 3D structure and activity from NEURON simulator to Blender

Opened 8 months ago by ankursinha. Modified 8 months ago

D: Easy F: Computational neuroscience F: Utilities good first issue S: Needs packaging Normal

#519 Package ngltr/sinaps: a Python package providing a fast, flexible and expressive tool to model signal propagation and ionic electrodiffusion in neurons

Opened 10 months ago by ankursinha. Modified 7 months ago

D: Easy F: Computational neuroscience good first issue S: Needs packaging Normal

#518 Package sreiter/ProMesh: Grid generation for scientific computations

Opened 11 months ago by ankursinha. Modified 11 months ago

D: Normal F: Utilities F: Computational neuroscience S: Needs packaging T: Software Normal

#513 Package ANNarchy/ANNarchy: ANNarchy (Artificial Neural Networks architect) is a parallel simulator for rate-coded and spiking neural networks.

2

Opened a year ago by ankursinha. Modified 5 months ago

F: Computational neuroscience good first issue S: Needs packaging T: Software D: Hard Normal

#508 Package optuna: A hyperparameter optimization framework

Opened a year ago by ankursinha. Modified a year ago

D: Normal F: Computational neuroscience F: Utilities S: Needs packaging T: Software Normal

#495 Package reservoirpy/reservoirpy: A simple and flexible code for Reservoir Computing architectures like Echo State Networks

Opened a year ago by ankursinha. Modified a year ago

D: Normal F: Computational neuroscience F: Utilities S: Needs packaging T: Software Low

#494 Package optimizer: Optimization of neuronal models

Opened a year ago by ankursinha. Modified a year ago

D: Normal F: Computational neuroscience good first issue S: Needs packaging T: Software Normal

#477 Package coyote: A visualization tool for reaction networks

Opened a year ago by ankursinha. Modified a year ago

D: Normal F: Computational neuroscience F: Utilities S: Needs packaging Normal

#454 Package facebookresearch/nevergrad: A Python toolbox for performing gradient-free optimization

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#453 Package EDEN: fully NeuroML compliant simulator

1

Opened 2 years ago by ankursinha. Modified 10 months ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#450 Package psyneulink: A block modeling system for cognitive neuroscience

3

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#449 Package MIIND

2

Opened 2 years ago by ankursinha. Modified 6 months ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#445 Package bluepysnap

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#437 Package FlyBrainLab/Neuroballad

1

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience F: Utilities S: Needs packaging T: Software Normal

#433 Package iqr: simulator for large scale neural systems

1

Opened 2 years ago by ankursinha. Modified 6 months ago

D: Normal F: Computational neuroscience T: Software S: Needs packaging S: Requested Normal

#426 Package genn-team/genn: GeNN is a GPU-enhanced Neuronal Network simulation environment based on code generation for Nvidia CUDA.

Opened 2 years ago by ankursinha. Modified 6 months ago

D: Normal F: Computational neuroscience T: Software Normal

#404 Package PyOIF: Computational tool for modelling of multi-cell flows in complex geometries

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Hard F: Computational neuroscience S: Needs packaging T: Software Normal

#396 Package pypesto: Parameter EStimation TOolbox for python

4

Opened 2 years ago by ankursinha. Modified 6 months ago

D: Easy F: Computational neuroscience F: Utilities good first issue T: Software S: Needs packaging Normal

#387 Package BlueBrain/CoreNeuron: Simulator optimized for large scale neural network simulations.

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience T: Software S: Needs packaging Normal

#382 Package BlueBrain/nmodl: Code Generation Framework For NEURON MODeling Language (python)

1

Opened 2 years ago by ankursinha. Modified a year ago

F: Computational neuroscience S: Needs packaging T: Software D: Hard Normal

#379 Package Pycabnn: Efficient and Extensible Software to Construct an Anatomical Basis for a Physiologically Realistic Neural Network Model

Opened 2 years ago by ankursinha. Modified 2 years ago

T: Software S: Needs packaging F: Computational neuroscience D: Easy good first issue Normal

#376 Package brian2tools

3

Opened 2 years ago by ankursinha. Modified 2 years ago

T: Software S: Needs packaging F: Computational neuroscience F: Utilities F: Data Analysis D: Normal Normal

#349 Package ctlee/gamer: Geometry-preserving Adaptive Mesher

3

Opened 2 years ago by ankursinha. Modified 10 months ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#344 Package nengo

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Low

#334 Package neurolib-dev/neurolib: Easy whole-brain modeling for computational neuroscientists

1

Opened 3 years ago by ankursinha. Modified 6 months ago

D: Easy F: Computational neuroscience S: Needs packaging T: Software Normal

#319 Package Ermentrout/xppaut: General differential equation solver and bifurcation package

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Computational neuroscience F: Utilities S: Needs packaging T: Software Normal

#297 Package netypyne-UI

1

Opened 3 years ago by ankursinha. Modified 3 years ago

F: Computational neuroscience S: Needs packaging T: Software D: Hard Normal

#286 Package flatironinstitute/CaImAn: Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

1

Opened 3 years ago by ankursinha. Modified a year ago

D: Normal F: Data Analysis F: Computational neuroscience S: Needs packaging T: Software Normal

#283 scidash/neuronunit: A package for data-driven validation of neuron and ion channel models using SciUnit

1

Opened 3 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#278 Package PyRates: a tool for building rate-based neural models

Opened 3 years ago by mhough. Modified 3 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#272 Package HBP's Neurorobotics Platform

3

Opened 3 years ago by mhough. Modified 3 years ago

D: Hard F: Computational neuroscience S: Needs packaging T: Software Normal

#264 Package neurox: A parallel & distributed asynchronous simulator of extended Hodgkin-Huxley neuron models

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#256 Package MEDYAN: Mechanochemical Dynamics of Active Networks

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#254 Package spyketorch: High-speed simulator of convolutional spiking neural networks with at most one spike per neuron.

1

Opened 3 years ago by ankursinha. Modified 3 years ago

F: Computational neuroscience S: Needs packaging T: Software D: Hard Normal

#236 Package psics

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#235 Package Genesis3/Neurospaces

3

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#233 Package SpiNNaker tools

3

Opened 3 years ago by ankursinha. Modified 6 months ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#230 Package edlut

1

Opened 4 years ago by ankursinha. Modified 4 years ago

F: Computational neuroscience S: Needs packaging T: Software D: Normal Low

#220 Package neuronC: Neural Simulation Language

1

Opened 4 years ago by ankursinha. Modified 4 years ago

S: Inactive upstream D: Normal F: Computational neuroscience T: Software Normal

#218 Package mien: Model Interaction Environment for Neuroscience

Opened 4 years ago by ankursinha. Modified 4 years ago

S: Inactive upstream D: Normal F: Computational neuroscience T: Software Low

#217 Package insilico: Neuronal Network Simulation Library

1

Opened 4 years ago by ankursinha. Modified 4 years ago

S: Inactive upstream D: Easy F: Computational neuroscience T: Software Low

#216 Package gepetto: web based platform to build neuroscience applications

1

Opened 4 years ago by ankursinha. Modified 2 years ago

D: Hard F: Computational neuroscience T: Software S: Needs packaging Normal

#215 Package bmtk: Brain Modeling Toolkit

4

Opened 4 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience T: Software Normal

#214 Package bdtoolbox: brain dynamics toolbox

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Computational neuroscience T: Software S: Needs packaging Normal

#213 Package vcell: Virtual Cell

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Hard F: Computational neuroscience S: Needs packaging T: Software Normal

#209 Package meredys: MEsoscopic REaction DYnamics Simulator

Opened 4 years ago by ankursinha. Modified 4 years ago

S: Inactive upstream D: Normal F: Computational neuroscience Low

#208 Package cellblender: Create, Simulate, Visualize, and Analyze Realistic 3D Cell Models

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#207 Package mcell: MCell Monte Carlo Simulator of Cellular Microphysiology

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#205 Package ecell

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

neuro-sig / NeuroFedora

Issues
254 Open 287 Closed

neuro-sig / NeuroFedora

Source Code

Issues 254 Open 287 Closed

Issues
254 Open 287 Closed