Issues - neuro-sig/NeuroFedora

#280 Package dcm4che Toolkit

9

Opened 4 years ago by alciregi. Modified 4 years ago

S: Needs packaging F: Neuroimaging T: Software D: Normal Low

#314 Package dcmstack: DICOM to Nifti conversion with meta data preservation

Opened 4 years ago by alciregi. Modified 2 years ago

D: Easy F: Utilities T: Software S: Needs packaging good first issue Low

#474 Package alizams: a DICOM viewer

5

Opened 2 years ago by alciregi. Modified 2 years ago

D: Normal F: Utilities S: Needs packaging T: Software Normal

#304 Package pynrrd

4

Opened 4 years ago by alciregi. Modified 2 years ago

D: Easy F: Utilities S: Needs packaging good first issue T: Software Normal

#352 Package phy: interactive visualization and manual spike sorting of large-scale ephys data

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#216 Package gepetto: web based platform to build neuroscience applications

1

Opened 5 years ago by ankursinha. Modified 2 years ago

D: Hard F: Computational neuroscience T: Software S: Needs packaging Normal

#76 Package dicomnifti: MRI images stored in DICOM format to NIfTI format

Opened 5 years ago by ankursinha. Modified 5 years ago

D: Easy F: Neuroimaging S: Needs packaging T: Software Normal

#475 Package: Whitlock-Group/TRACER: A toolkit to register and visualize anatomical coordinates in the rat brain

1

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Neuroimaging F: Utilities S: Needs packaging T: Software Normal

#398 Package NeurodataWithoutBorders/nwb-jupyter-widgets: Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.

Opened 3 years ago by ankursinha. Modified 3 years ago

F: Data Analysis F: Utilities good first issue S: Needs packaging T: Software D: Normal Normal

#395 Package bokeh: Interactive Data Visualization in the browser, from Python

1

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#541 Package python-meshparty: A package to work with meshes, designed around use cases for analyzing neuronal morphology.

3

Opened a year ago by ankursinha. Modified a year ago

D: Easy F: Data Analysis F: Utilities good first issue S: Needs packaging T: Software Normal

#264 Package neurox: A parallel & distributed asynchronous simulator of extended Hodgkin-Huxley neuron models

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#527 Package RatInABox: A python package for modelling locomotion in complex environments and spatially/velocity selective cell activity.

4

Opened 2 years ago by ankursinha. Modified a year ago

D: Easy F: Computational neuroscience F: Utilities good first issue S: Needs packaging T: Software Normal

#453 Package EDEN: fully NeuroML compliant simulator

1

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#138 Package TractoR: Tractography with R

Opened 5 years ago by ankursinha. Modified 5 years ago

F: Neuroimaging D: Normal S: Needs packaging T: Software Normal

#100 Package solar-eclipse: An Imaging Genetics Analyses Software

Opened 5 years ago by ankursinha. Modified 5 years ago

F: Neuroimaging S: Needs packaging T: Software Normal

#522 Package ipympl: matplotlib extension for jupyter

1

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Easy good first issue S: Needs packaging T: Software F: Utilities Normal

#372 Package llvmlite: A lightweight LLVM python binding for writing JIT compilers

7

Opened 3 years ago by ankursinha. Modified 2 years ago

D: Normal F: Utilities S: Needs packaging S: Waiting on upstream T: Software Normal

#506 Package barahona-research-group/hcga: Highly Comparative Graph Analysis - Code for network phenotyping

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal good first issue S: Needs packaging T: Software F: Data Analysis F: Utilities Normal

#373 Package GHFC/HyPyP: The Hyperscanning Python Pipeline

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Data Analysis F: Neuroimaging S: Needs packaging T: Software good first issue Normal

#450 Package psyneulink: A block modeling system for cognitive neuroscience

3

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#482 Package mechmotum/cyipopt: Cython interface for the interior point optimzer IPOPT

2

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Utilities F: Data Analysis S: Needs packaging T: Software Normal

#94 Package openelectrophy

Opened 5 years ago by ankursinha. Modified 5 years ago

F: Data Analysis S: Needs packaging T: Software Normal

#484 Package aesara-devs/aesara: Aesara is a Python library that allows one to define, optimize, and efficiently evaluate mathematical expressions involving multi-dimensional arrays.

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#62 Package 9ML-toolkit

1

Opened 5 years ago by ankursinha. Modified 5 years ago

D: Normal F: Computational neuroscience S: Needs packaging T: Software Normal

#213 Package vcell: Virtual Cell

Opened 5 years ago by ankursinha. Modified 5 years ago

D: Hard F: Computational neuroscience S: Needs packaging T: Software Normal

#35 Package Btmorph

Opened 5 years ago by ankursinha. Modified 5 years ago

F: Utilities T: Software S: Needs packaging Normal

#553 Package Grape: GRAPE is a Rust/Python Graph Representation Learning library for Predictions and Evaluation

2

Opened 11 months ago by ankursinha. Modified 11 months ago

D: Normal F: Computational neuroscience F: Utilities S: Needs packaging T: Software F: Data Analysis good first issue Normal

#481 Package PEtab-dev/libpetab-python: Python package for working with PEtab files

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#84 Package klustakwik: automatic clustering of continuous data into a mixture of Gaussians

Opened 5 years ago by ankursinha. Modified 5 years ago

F: Data Analysis S: Needs packaging T: Software Normal

#58 Package sigviewer

2

Opened 5 years ago by ankursinha. Modified 3 years ago

F: Data Analysis D: Normal S: Needs packaging T: Software Normal

#532 Package mnelab: a GUI for MNE

3

Opened 2 years ago by ankursinha. Modified a year ago

D: Hard F: Data Analysis F: Neuroimaging S: Needs packaging T: Software Normal

#347 Package python-doit

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Utilities S: Needs packaging T: Software Low

#139 Package FEAT

Opened 5 years ago by ankursinha. Modified 5 years ago

D: Normal F: Neuroimaging S: Needs packaging T: Software Normal

#454 Package facebookresearch/nevergrad: A Python toolbox for performing gradient-free optimization

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#260 Package fmriprep: A Robust Preprocessing Pipeline for fMRI Data

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Hard F: Neuroimaging S: Needs packaging T: Software Low

#386 Package gallantlab/pycortex: Pycortex is a python-based toolkit for surface visualization of fMRI data

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Easy F: Neuroimaging F: Utilities good first issue S: Needs packaging S: Needs documentation T: Software Normal

#237 Package vaa3D

Opened 5 years ago by ankursinha. Modified 4 years ago

D: Normal F: Neuroimaging T: Software S: Needs packaging Normal

#523 Package genepy3D: a python library for quantitative geometry,

1

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities good first issue S: Needs packaging T: Software Normal

#401 Package pyplane: Phase plane analysis of nonlinear systems

25

Opened 3 years ago by ankursinha. Modified 2 years ago

D: Easy F: Utilities good first issue S: Needs packaging T: Software Normal

#113 Package D3D: Java-based 3D reaction-diffusion simulator

1

Opened 5 years ago by ankursinha. Modified 2 years ago

F: Computational neuroscience S: Needs packaging T: Software Normal

#512 Package ephyviewer: Simple viewers for ephys signals, events, video and more

2

Opened 2 years ago by ankursinha. Modified a year ago

D: Easy F: Data Analysis good first issue S: Needs packaging T: Software Normal

#12 Package python-dmri-commit

2

Opened 5 years ago by ankursinha. Modified 2 years ago

T: Software S: Needs packaging F: Neuroimaging Normal

#511 Package sonpy: The Python interface to the 64-bit Son library

3

Opened 2 years ago by ankursinha. Modified a year ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software S: Bad licence Normal

#358 Package betterbib: Update BibTeX files with info from online resources.

7

Opened 4 years ago by ankursinha. Modified 2 years ago

D: Easy good first issue S: Needs packaging T: Software F: Utilities Normal

#477 Package coyote: A visualization tool for reaction networks

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience F: Utilities S: Needs packaging Normal

#191 Package MMVT: Multi-Modality Visualization Tool

Opened 5 years ago by ankursinha. Modified 5 years ago

D: Normal F: Neuroimaging S: Needs packaging T: Software Normal

#45 Package python-uncertainpy

2

Opened 5 years ago by ankursinha. Modified 5 years ago

F: Utilities S: Needs packaging T: Software Normal

#558 Package pyomexmeta: Python bindings for libOmexMeta, a library aimed at providing developer-level support for reading, writing, editing and managing semantic annotations for biosimulation models.

1

Opened 8 months ago by ankursinha. Modified 8 months ago

D: Hard F: Computational neuroscience F: Utilities S: Needs packaging T: Software Normal

#83 Package itksnap: segment structures in 3D medical images

Opened 5 years ago by ankursinha. Modified 5 years ago

F: Neuroimaging T: Software S: Needs packaging Normal

neuro-sig / NeuroFedora

Issues
271 Open 301 Closed

neuro-sig / NeuroFedora

Source Code

Issues 271 Open 301 Closed

Issues
271 Open 301 Closed