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273 Open
299 Closed
107 Open Issues
107 Open issues
91 Closed Issues
198 Open & Closed Issues
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F: Computational neuroscience
F: Data Analysis
F: Neuroimaging
F: Utilities
good first issue
S: Bad licence
S: Future meeting
S: Inactive upstream
S: In review
S: In testing
S: Needs-commit-rights
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S: Needs documentation
S: Needs import
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S: Requested
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T: Blog
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T: Documentation
T: Outreach and dissemination
T: Software
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F34 Beta freeze 2021-02-23
F30 beta
F30 GA
CNS2019
F31 GA 2019-10-29
Urgent: the Daleks have attacked!
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#509
neurophysiological-analysis/FiNN: A Python Toolbox for the analysis of electrophysiological data
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Data Analysis
F: Utilities
S: Needs packaging
Normal
#484
Package aesara-devs/aesara: Aesara is a Python library that allows one to define, optimize, and efficiently evaluate mathematical expressions involving multi-dimensional arrays.
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Data Analysis
F: Utilities
S: Needs packaging
T: Software
Normal
#394
Package alejoe91/MEArec: Fast and customizable of extracellular recordings on MEA
1
Opened
3 years ago
by
ankursinha
. Modified
2 years ago
D: Easy
F: Data Analysis
F: Utilities
S: Needs packaging
T: Software
good first issue
Normal
#289
Package AlexEMG/DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals, including humans
Opened
4 years ago
by
ankursinha
. Modified
4 years ago
D: Normal
F: Utilities
S: Needs packaging
T: Software
Normal
#362
Package AllenInstitute/AllenSDK: code for reading and processing Allen Institute for Brain Science data
Opened
3 years ago
by
ankursinha
. Modified
3 years ago
D: Normal
F: Utilities
S: Needs packaging
T: Software
Normal
#480
Package AMICI-dev/AMICI: Advanced Multilanguage Interface to CVODES and IDAS
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Utilities
S: Needs packaging
T: Software
Normal
#476
Package Anipose
1
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Data Analysis
F: Neuroimaging
F: Utilities
S: Needs packaging
T: Software
Normal
#487
Package autoreject/autoreject: Automated rejection and repair of bad trials/sensors in M/EEG
1
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Data Analysis
F: Utilities
S: Needs packaging
T: Software
good first issue
Normal
#506
Package barahona-research-group/hcga: Highly Comparative Graph Analysis - Code for network phenotyping
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
good first issue
S: Needs packaging
T: Software
F: Data Analysis
F: Utilities
Normal
#358
Package betterbib: Update BibTeX files with info from online resources.
7
Opened
4 years ago
by
ankursinha
. Modified
2 years ago
D: Easy
good first issue
S: Needs packaging
T: Software
F: Utilities
Normal
#375
Package Bioconductor - bigPint
Opened
3 years ago
by
ankursinha
. Modified
3 years ago
D: Normal
F: Data Analysis
F: Utilities
S: Needs packaging
T: Software
Normal
#524
Package blenderNEURON: Exports 3D structure and activity from NEURON simulator to Blender
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Easy
F: Computational neuroscience
F: Utilities
good first issue
S: Needs packaging
Normal
#439
Package BlueBrain/morph-tool: A toolbox for morphology editing. It aims to provide small helper programs that perform simple tasks.
Opened
3 years ago
by
ankursinha
. Modified
3 years ago
D: Normal
F: Data Analysis
F: Utilities
S: Needs packaging
T: Software
Normal
#462
Package BlueBrain/NeuroR: A collection of tools to repair morphologies
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Utilities
S: Needs packaging
T: Software
Normal
#345
Package Brainrender
Opened
4 years ago
by
ankursinha
. Modified
4 years ago
D: Normal
F: Utilities
S: Needs packaging
T: Software
Normal
#376
Package brian2tools
3
Opened
3 years ago
by
ankursinha
. Modified
2 years ago
T: Software
S: Needs packaging
F: Computational neuroscience
F: Utilities
F: Data Analysis
D: Normal
Normal
#35
Package Btmorph
Opened
5 years ago
by
ankursinha
. Modified
5 years ago
F: Utilities
T: Software
S: Needs packaging
Normal
#359
Package cellfinder: Automated 3D cell detection and registration of whole-brain images
Opened
3 years ago
by
ankursinha
. Modified
3 years ago
D: Normal
F: Data Analysis
F: Neuroimaging
F: Utilities
S: Needs packaging
T: Software
Normal
#477
Package coyote: A visualization tool for reaction networks
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Computational neuroscience
F: Utilities
S: Needs packaging
Normal
#504
Package CSDLLab/PyNeval: PyNeval, a toolbox for quantative analysis on neuron reconstruction result.
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Easy
F: Data Analysis
F: Utilities
S: Needs packaging
T: Software
Normal
#510
Package cselab/korali: High-performance framework for uncertainty quantification, optimization and reinforcement learning.
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Utilities
T: Software
S: Needs packaging
Normal
#443
Package dandi: Command line client for interaction with DANDI archive elements
1
Opened
3 years ago
by
ankursinha
. Modified
2 years ago
D: Easy
F: Data Analysis
F: Neuroimaging
F: Utilities
S: Needs packaging
T: Software
Normal
#471
Package dandischema
1
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Data Analysis
F: Utilities
S: Needs packaging
T: Software
D: Easy
good first issue
Normal
#314
Package dcmstack: DICOM to Nifti conversion with meta data preservation
Opened
4 years ago
by
alciregi
. Modified
2 years ago
D: Easy
F: Utilities
T: Software
S: Needs packaging
good first issue
Low
#40
Package debruijn
Opened
5 years ago
by
ankursinha
. Modified
5 years ago
F: Utilities
S: Needs packaging
T: Software
Normal
#500
Package Donders-Institute/bidscoin: BIDScoin converts your source-level neuroimaging data to BIDS
6
Opened
2 years ago
by
ankursinha
. Modified
5 months ago
D: Normal
F: Data Analysis
F: Neuroimaging
F: Utilities
S: Needs packaging
T: Software
Normal
#319
Package Ermentrout/xppaut: General differential equation solver and bifurcation package
Opened
4 years ago
by
ankursinha
. Modified
4 years ago
D: Normal
F: Computational neuroscience
F: Utilities
S: Needs packaging
T: Software
Normal
#454
Package facebookresearch/nevergrad: A Python toolbox for performing gradient-free optimization
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Computational neuroscience
F: Data Analysis
F: Utilities
S: Needs packaging
T: Software
Normal
#483
Package fides-dev/fides: Trust Region Optimization in Python
2
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Easy
good first issue
F: Utilities
F: Data Analysis
S: Needs packaging
T: Software
Normal
#434
Package FlyBrainLab components
Opened
3 years ago
by
ankursinha
. Modified
3 years ago
D: Normal
F: Data Analysis
F: Utilities
T: Software
S: Needs packaging
Normal
#435
Package FlyBrainLab/FBLClient: FBLClient is a Python package that implements an API for accessing and manipulating the Fruit Fly Brain Observatory (FFBO) Project, built for the FlyBrainLab initiative.
1
Opened
3 years ago
by
ankursinha
. Modified
2 years ago
D: Easy
F: Data Analysis
F: Utilities
S: Needs packaging
T: Software
S: Requested
S: On hold
Normal
#437
Package FlyBrainLab/Neuroballad
1
Opened
3 years ago
by
ankursinha
. Modified
3 years ago
D: Normal
F: Computational neuroscience
F: Utilities
S: Needs packaging
T: Software
Normal
#436
Package FlyBrainLab/NeuroMynerva
Opened
3 years ago
by
ankursinha
. Modified
3 years ago
D: Hard
F: Data Analysis
F: Utilities
S: Needs packaging
T: Software
Normal
#131
Package FSL-FEEDS
Opened
5 years ago
by
mhough
. Modified
5 years ago
D: Easy
F: Utilities
S: Needs packaging
T: Software
Normal
#386
Package gallantlab/pycortex: Pycortex is a python-based toolkit for surface visualization of fMRI data
Opened
3 years ago
by
ankursinha
. Modified
3 years ago
D: Easy
F: Neuroimaging
F: Utilities
good first issue
S: Needs packaging
S: Needs documentation
T: Software
Normal
#523
Package genepy3D: a python library for quantitative geometry,
1
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Data Analysis
F: Utilities
good first issue
S: Needs packaging
T: Software
Normal
#489
Package generateDS: Generate Python data structures and XML parser from Xschema
1
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Easy
F: Utilities
S: Needs packaging
T: Software
good first issue
Normal
#553
Package Grape: GRAPE is a Rust/Python Graph Representation Learning library for Predictions and Evaluation
2
Opened
10 months ago
by
ankursinha
. Modified
10 months ago
D: Normal
F: Computational neuroscience
F: Utilities
S: Needs packaging
T: Software
F: Data Analysis
good first issue
Normal
#50
Package hbp_archive
Opened
5 years ago
by
ankursinha
. Modified
5 years ago
F: Utilities
S: Needs packaging
T: Software
Normal
#397
Package holoviews: Stop plotting your data - annotate your data and let it visualize itself.
Opened
3 years ago
by
ankursinha
. Modified
3 years ago
D: Normal
F: Data Analysis
F: Utilities
S: Needs packaging
T: Software
Normal
#81
Package incf-nidash-oneclick: one click sharing
Opened
5 years ago
by
ankursinha
. Modified
5 years ago
F: Utilities
T: Software
S: Needs packaging
Normal
#522
Package ipympl: matplotlib extension for jupyter
1
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Easy
good first issue
S: Needs packaging
T: Software
F: Utilities
Normal
#486
Package ipympl: Matplotlib Jupyter Extension
1
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Utilities
S: Needs packaging
T: Software
Normal
#244
Package k2pdfopt
1
Opened
4 years ago
by
ankursinha
. Modified
4 years ago
F: Utilities
T: Software
D: Normal
S: Needs packaging
Normal
#526
Package kaleido: Static image export for web-based visualization libraries with zero dependencies
2
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
F: Utilities
S: Needs packaging
T: Software
D: Hard
Normal
#469
Package Klusters/Neuroscope/NDManager: Free Data Visualization and Processing Tools for Neurophysiologists
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Data Analysis
F: Neuroimaging
F: Utilities
S: Needs packaging
T: Software
Normal
#48
Package L2L
Opened
5 years ago
by
ankursinha
. Modified
5 years ago
F: Utilities
S: Needs packaging
T: Software
Normal
#85
Package libGDF: C++ implementation of GDF
Opened
5 years ago
by
ankursinha
. Modified
5 years ago
F: Utilities
S: Needs packaging
T: Software
Normal
#485
Package lmcinnes/umap: Uniform Manifold Approximation and Projection
Opened
2 years ago
by
ankursinha
. Modified
2 years ago
D: Normal
F: Data Analysis
F: Utilities
S: Needs packaging
T: Software
Normal
#562
Package lqrt: obust Hypothesis Testing of Location Parameters using Lq-Likelihood-Ratio-Type Test
1
Opened
6 months ago
by
ankursinha
. Modified
6 months ago
D: Easy
F: Data Analysis
F: Utilities
S: Needs packaging
S: Needs review
Normal