Issues - neuro-sig/NeuroFedora

#583 Create container image to run tests suite: to allow us to install `dnf` deps

1

Opened 5 months ago by ankursinha. Modified 4 months ago

D: Easy T: Software Normal

#580 Limiting/reducing/rethinking our Python packaging/packages

25

Opened 6 months ago by ankursinha. Modified 5 months ago

T: Community T: Software S: Needs review Normal

#578 Package NiMARE

Opened 9 months ago by gui1ty. Modified 9 months ago

Normal

#570 Package NeuroEditor: for the visualization and edition of morphological tracings

4

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#567 Set monitoring status in dist-git to "Monitoring" for packages using Packit

12

Opened 2 years ago by gui1ty. Modified a year ago

S: Next meeting Normal

#566 Update python-steps to latest release (5.0.3)

9

Opened 2 years ago by gui1ty. Modified a year ago

S: Next meeting S: WIP T: Software Normal

#563 State of python packages that use nodejs/npm (bokeh/plotly)

7

Opened 2 years ago by ankursinha. Modified 21 days ago

D: Normal S: Next meeting T: Software S: WIP Normal

#560 Package vispy: high-performance interactive 2D/3D data visualization library

9

Opened 2 years ago by ankursinha. Modified 9 months ago

D: Normal F: Data Analysis F: Utilities good first issue S: Needs packaging T: Software Normal

#556 Package sciris: Fast, flexible tools to simplify scientific Python

1

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Easy F: Utilities good first issue T: Software S: In review Normal

#555 Package AstroVascPy

4

Opened 2 years ago by ankursinha. Modified 9 months ago

D: Normal F: Computational neuroscience T: Software Normal

#554 Package neurodamus: BBP Simulation Control application for Neuron

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience T: Software S: Needs packaging Normal

#553 Package Grape: GRAPE is a Rust/Python Graph Representation Learning library for Predictions and Evaluation

2

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Computational neuroscience F: Utilities S: Needs packaging T: Software F: Data Analysis good first issue Normal

#550 Package PHATE: Visualizing Transitions and Structure for Biological Data Exploration

1

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Easy F: Data Analysis good first issue S: Needs packaging T: Software Normal

#547 Package MouseLand/rastermap: A multi-dimensional embedding algorithm

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Utilities good first issue S: Needs packaging T: Software Normal

#546 Package sanpy: software for whole-cell current clamp analysis

Opened 2 years ago by ankursinha. Modified 2 years ago

D: Normal F: Data Analysis F: Neuroimaging good first issue S: Needs packaging T: Software Normal

#545 Package pynapple: PYthon Neural Analysis Package

1

Opened 2 years ago by ankursinha. Modified 2 years ago

F: Data Analysis D: Easy good first issue T: Software S: Needs packaging Normal

#532 Package mnelab: a GUI for MNE

3

Opened 3 years ago by ankursinha. Modified 2 years ago

D: Hard F: Data Analysis F: Neuroimaging S: Needs packaging T: Software Normal

#531 Package ontquery: a framework querying ontology terms

1

Opened 3 years ago by ankursinha. Modified a year ago

D: Easy F: Utilities good first issue S: Needs packaging T: Software Normal

#529 Package Neurokit: Python Toolbox for Neurophysiological Signal Processing

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Data Analysis good first issue S: Needs packaging T: Software Normal

#526 Package kaleido: Static image export for web-based visualization libraries with zero dependencies

2

Opened 3 years ago by ankursinha. Modified 3 years ago

F: Utilities S: Needs packaging T: Software D: Hard Normal

#525 Package graphia: visual analytics application developed to aid the interpretation of large and complex datasets

1

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Data Analysis S: Needs packaging T: Software Normal

#519 Package ngltr/sinaps: a Python package providing a fast, flexible and expressive tool to model signal propagation and ionic electrodiffusion in neurons

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Easy F: Computational neuroscience good first issue S: Needs packaging Normal

#518 Package sreiter/ProMesh: Grid generation for scientific computations

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Utilities F: Computational neuroscience S: Needs packaging T: Software Normal

#516 Package biokit/biokit: Bioinformatics in Python

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Easy F: Data Analysis good first issue S: Needs packaging T: Software Normal

#510 Package cselab/korali: High-performance framework for uncertainty quantification, optimization and reinforcement learning.

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Utilities T: Software S: Needs packaging Normal

#509 neurophysiological-analysis/FiNN: A Python Toolbox for the analysis of electrophysiological data

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging Normal

#506 Package barahona-research-group/hcga: Highly Comparative Graph Analysis - Code for network phenotyping

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Normal good first issue S: Needs packaging T: Software F: Data Analysis F: Utilities Normal

#504 Package CSDLLab/PyNeval: PyNeval, a toolbox for quantative analysis on neuron reconstruction result.

Opened 3 years ago by ankursinha. Modified 3 years ago

D: Easy F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#500 Package Donders-Institute/bidscoin: BIDScoin converts your source-level neuroimaging data to BIDS

8

Opened 3 years ago by ankursinha. Modified 4 months ago

D: Normal F: Data Analysis F: Neuroimaging F: Utilities S: Needs packaging T: Software Normal

#494 Package optimizer: Optimization of neuronal models

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Computational neuroscience good first issue S: Needs packaging T: Software Normal

#493 Adding Fedora badges to GitHub repos

3

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Easy good first issue T: Community T: Documentation T: Outreach and dissemination Normal

#490 Package python-pooch: A friend to fetch your data files

1

Opened 4 years ago by major. Modified 2 years ago

T: Software D: Easy S: Needs packaging F: Utilities Normal

#489 Package generateDS: Generate Python data structures and XML parser from Xschema

1

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Easy F: Utilities S: Needs packaging T: Software good first issue Normal

#487 Package autoreject/autoreject: Automated rejection and repair of bad trials/sensors in M/EEG

1

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software good first issue Normal

#485 Package lmcinnes/umap: Uniform Manifold Approximation and Projection

2

Opened 4 years ago by ankursinha. Modified a year ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#484 Package aesara-devs/aesara: Aesara is a Python library that allows one to define, optimize, and efficiently evaluate mathematical expressions involving multi-dimensional arrays.

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#483 Package fides-dev/fides: Trust Region Optimization in Python

2

Opened 4 years ago by ankursinha. Modified 3 years ago

D: Easy good first issue F: Utilities F: Data Analysis S: Needs packaging T: Software Normal

#481 Package PEtab-dev/libpetab-python: Python package for working with PEtab files

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#480 Package AMICI-dev/AMICI: Advanced Multilanguage Interface to CVODES and IDAS

Opened 4 years ago by ankursinha. Modified a year ago

D: Normal F: Utilities S: Needs packaging T: Software Normal

#479 Package myst-parser - An extended commonmark compliant parser, with bridges to docutils/sphinx

1

Opened 4 years ago by major. Modified 3 years ago

D: Easy F: Utilities S: Needs packaging T: Software Normal

#477 Package coyote: A visualization tool for reaction networks

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Computational neuroscience F: Utilities S: Needs packaging Normal

#476 Package Anipose

1

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Data Analysis F: Neuroimaging F: Utilities S: Needs packaging T: Software Normal

#475 Package: Whitlock-Group/TRACER: A toolkit to register and visualize anatomical coordinates in the rat brain

1

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Data Analysis F: Neuroimaging F: Utilities S: Needs packaging T: Software Normal

#473 Package spikeinterface: module for creating flexible and robust spike sorting pipelines.

6

Opened 4 years ago by ankursinha. Modified 3 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#470 Package lukelbd/proplot: 🎨 A powerful matplotlib wrapper for making beautiful, publication-quality graphics

3

Opened 4 years ago by ankursinha. Modified a year ago

D: Easy F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#469 Package Klusters/Neuroscope/NDManager: Free Data Visualization and Processing Tools for Neurophysiologists

Opened 4 years ago by ankursinha. Modified 4 years ago

T: Software S: Needs packaging F: Neuroimaging F: Utilities F: Data Analysis D: Normal Normal

#466 Package python-mearec: Fast and customizable simulation of extracellular recordings on Multi-Electrode-Arrays.

3

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Data Analysis F: Utilities S: Needs packaging T: Software Normal

#463 Package VND: neuronal visualization program

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Hard S: Needs packaging F: Utilities T: Software S: RPM Fusion Normal

#462 Package BlueBrain/NeuroR: A collection of tools to repair morphologies

Opened 4 years ago by ankursinha. Modified 4 years ago

D: Normal F: Utilities S: Needs packaging T: Software Normal

#461 Tracker ticket: upstream contributions

11

Opened 4 years ago by ankursinha. Modified 3 years ago

D: Easy T: Community S: Future meeting Normal

neuro-sig / NeuroFedora

Issues
242 Open 338 Closed

neuro-sig / NeuroFedora

Source Code

Issues 242 Open 338 Closed

Issues
242 Open 338 Closed